Insertion junction: CLIP2.064335_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064335
Chromosome:chromosome 9
Location:5545400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409350 RLI1 (1 of 1) K06174 - ATP-binding cassette, sub-family E, member 1 (ABCE1); Fe-S ABC transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGGGATGTGTCAGGGATGTGTGTCTGTGTGGAGCGGAACGGGCTT
Internal bar code:GTTCCTTACGGATTCTGAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2445
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTATGAAATGCTGCCG
Suggested primer 2:GGATGAGGCGGGTGTAGATG