Insertion junction: CLIP2.064341_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064341
Chromosome:chromosome 6
Location:7423814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300450 (1 of 14) IPR003593//IPR003959//IPR027417 - AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase 3'UTR
Cre06.g300500 ADCY1,CYA18 Adenylyl cyclase; (1 of 1) PTHR11347//PTHR11347:SF132 - CYCLIC NUCLEOTIDE PHOSPHODIESTERASE // PDE1C, ISOFORM E 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGGCCCCCGCACACGGTTGACCATGTTGAGCGACGGACCGACCGGGA
Internal bar code:GAGGCGTCTAGATAACGTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1569
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGGGTGGATGGACTGA
Suggested primer 2:GAATGCTGGGGCCTTTTTGG