Insertion junction: CLIP2.064344_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064344
Chromosome:chromosome 2
Location:5036030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111000 RRA1,CGL9 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTGAGTCAGGTTACTAGTCCTTTTCTTTAACTCCTCGCGCCTTGGAA
Internal bar code:TTTTGCTGTTTGTGGCGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGCAATCCCACAAAACG
Suggested primer 2:ACAAGTATCCAGTGGGCAGC