Insertion junction: CLIP2.064353_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064353
Chromosome:chromosome 3
Location:6900443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198100 BET1 ER-to-Golgi Qc-SNARE protein, Bet1/mBET1 family (Qc.II); (1 of 1) K08504 - blocked early in transport 1 (BET1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGATAAATTTGTTCACTTTGTTGAAGCAGAGGAAACAGAGAATTACCG
Internal bar code:GGGCCGTTTGATCATCTGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTAATGCCCCTGTTGGAG
Suggested primer 2:GAAAAGGTTCACCGGCAACC