Insertion junction: CLIP2.064354_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064354
Chromosome:chromosome 6
Location:7596515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301806 (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR
Cre06.g301850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCAGATTACCGGTATGACCCGACGCGTGCCTCATGCTTTACATGAAG
Internal bar code:CTTTCGAATTGCCGAAGAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGGTGTCGTTTGCTCCT
Suggested primer 2:TGAGCTGGCAGATCAAGGTG