Insertion junction: CLIP2.064366_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064366
Chromosome:chromosome 12
Location:3369788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498150 (1 of 2) PTHR22847//PTHR22847:SF431 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGCTTTCCTACACCACGTTGTACGCATGCACCGGCTCATCGGCTGC
Internal bar code:TGCAGCGTTACGTTGTAAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3326
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCATCGATGTGGGAGGG
Suggested primer 2:AGTGGGCGTGTAAAGGAGTG