Insertion junction: CLIP2.064373_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064373
Chromosome:chromosome 12
Location:8645425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548100 UBC7 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT); Putative Ubiquitin-protein ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACATGACGCCGCCGCATGCATCATCGTGGGCCTTGTGAGCTGCGTAG
Internal bar code:GTACAGAAAATGATGATTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1668
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCCTGGATCTGTCCTA
Suggested primer 2:CCTCTCCCTTCCCTACCGAA