Insertion junction: CLIP2.064381_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064381
Chromosome:chromosome 3
Location:5485049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184600 RWP7 (1 of 1) IPR003035//IPR009057 - RWP-RK domain // Homeodomain-like; RWP-RK transcription factor 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGATCCTGGATCTCCGCCGCTGCGGCCCGTCTTGGCGCGGGAGTGT
Internal bar code:GAGCAGATGGCGAAAGAGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1263
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGCAGGTACCTACAA
Suggested primer 2:GCATCCACGGCATCATTCAC