Insertion junction: CLIP2.064382_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064382
Chromosome:chromosome 7
Location:4590643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344200 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATTGCTGAGGGAGTCGGATGACGGTTGCTCGGATCCGGCCACACCTC
Internal bar code:TAGTAGGACGTGTAATTCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACACTTGCTGCACAC
Suggested primer 2:AAACGGTCAATGTTGGCGTG