Insertion junction: CLIP2.064383_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064383
Chromosome:chromosome 16
Location:5705325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680850 OPR103,MDA1 atpA mRNA stabilization factor; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAGAACCGCGGCGACAACCTGTACCATACTTGACGGCCACAATTAAA
Internal bar code:TATCTTGGGAATACGTTTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1084
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAAAACAACAGCCGCGA
Suggested primer 2:GCCCTTCTCATAGGTCTCGC