Insertion junction: CLIP2.064385_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064385
Chromosome:chromosome 5
Location:989931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247150 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAAAGCTGTGATCGATCAAGGCCCGCCCCGTATGCTAGGTCCCGCAA
Internal bar code:GGGTTGACCTCTTTGATCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCACGTACGGTACCCCA
Suggested primer 2:GAGGTGATGGTGAGGGTGTG