Insertion junction: CLIP2.064387_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064387
Chromosome:chromosome 1
Location:6675755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047500 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAACGAGTGAGCAGCCCTGAGCAATGCCTGGTCGGGACGTGTCTGCCC
Internal bar code:AGGGCTCTAAGTTTAGGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1602
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTGCCGTTTAGAGCAA
Suggested primer 2:ACCTATTGGGGGAGGCATCT