Insertion junction: CLIP2.064391_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064391
Chromosome:chromosome 3
Location:5093910
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g180400 (1 of 12) IPR011010//IPR013762 - DNA breaking-rejoining enzyme, catalytic core // Integrase-like, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTTGTGGCCTTCCACTTGCTGGACCCAGCAGCCCCCCCGTCGCTGGA
Internal bar code:CTGGAGGCCAAACGCGATCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCATACTACGGCCTCC
Suggested primer 2:TCGAGACCAGGAGACGATGT