Insertion junction: CLIP2.064396_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064396
Chromosome:chromosome 13
Location:1218162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGTGCTTAGTGCGCTCCGAAAGCTCAAGCAAGCTTGTCTTGGCTTGA
Internal bar code:GTGGGATCTAAAGACGTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1262
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGCGTGCTCACTCAAA
Suggested primer 2:TTTCTGCCTGACCCTCGAAC