Insertion junction: CLIP2.064400_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064400
Chromosome:chromosome 3
Location:3063288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163900 PWR3 (1 of 14) PF04720 - PDDEXK-like family of unknown function (PDDEXK_6); PWR motif protein 3'UTR
Cre03.g163950 CDO2 (1 of 2) 1.13.11.20 - Cysteine dioxygenase; Cysteine dioxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGCTTCTACTGATCGTAACATGTGTTCCGGTGCGCACCAACTTTATG
Internal bar code:TCGATGTGAGTCGCTGTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGTCTGCGTGCTTCTA
Suggested primer 2:ACACACATCGAGGACTGCAG