Insertion junction: CLIP2.064423_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064423
Chromosome:chromosome 6
Location:7557719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301500 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGTTCCCTCCCGCACTACCGGGCTTCGTGTTTGTCCCACACTCTCAG
Internal bar code:ATGGTAGACGTACTGAGCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2046
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCCCAGCATTCCGCATG
Suggested primer 2:CTCGCATGCATGTGTGTACG