Insertion junction: CLIP2.064458_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064458
Chromosome:chromosome 7
Location:39673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312150 (1 of 1) PF00580//PF13361 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // UvrD-like helicase C-terminal domain (UvrD_C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTAGCACCACACCAGCACAACAAAGCTTGATACATAACACTGTACCGT
Internal bar code:TTTAGTAGTCAAGGCAGCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:22.7273
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TACATTTCCCCCTTCGTGGC
Suggested primer 2:TCCAAAGTCGGGTATGGTGC