Insertion junction: CLIP2.064473_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064473
Chromosome:chromosome 10
Location:6694972
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g466550 TF2H1 General transcription factor IIH subunit 1; (1 of 1) IPR005607//IPR027079 - BSD domain // TFIIH subunit Tfb1/p62 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAGCTAGTACGCTCACATAACCAAGCGCGCTCAACCCTGCTCCCAGT
Internal bar code:GTTCTATAACCTACCTCGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTGTCTCTCTTGACCC
Suggested primer 2:GCCCGTGTGATGTCCACTAA