Insertion junction: CLIP2.064491_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064491
Chromosome:chromosome 3
Location:8243358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199900 EIF4E Eukaryotic translation initiation factor 4E; (1 of 1) K03259 - translation initiation factor 4E (EIF4E) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTGTGGGTCGGGGCTTGGTCGACTGGGTGCATGGCCCAGGGAAGGC
Internal bar code:CTGGATAGAAATACGCTTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1546
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTTCTCCACTGCCTTG
Suggested primer 2:CAAGGACCGCTACATGGTGT