Insertion junction: CLIP2.064499_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064499
Chromosome:chromosome 11
Location:904595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467654 (1 of 1) K13117 - ATP-dependent RNA helicase DDX35 [EC:3.6.4.13] (DHX35) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTACACCAGCCGGACTGGCCGCAGCAAGTCGAACTGTACAACGCAAC
Internal bar code:CACTCGGAGAGTCGGTGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1800
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAACGAGCTGCACAAAA
Suggested primer 2:CCCCTCCCCCACACAAATAC