Insertion junction: CLIP2.064500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064500
Chromosome:chromosome 16
Location:1137504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649950 HFO24,HFO40 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGGTCGTTAGGTAATGCTTTGCAGGAGGCCTACCCGGGCCTGCTGCG
Internal bar code:GGGATGTTTTGCGAGACGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1836
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAGCTACCCCCTAACCC
Suggested primer 2:TCCAGGAACGTCTTCAGCAC