Insertion junction: CLIP2.064504_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064504
Chromosome:chromosome 1
Location:1441264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007651 PUS10 (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGCAGCGCTAGCCCCAAGCCCGACCATCCCTGATATTCCGCAGATGA
Internal bar code:TCCTGGCTGCGGGGTCGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:85.2459
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTCACAACAACCAACAT
Suggested primer 2:TATACACATACACGCGCGCT