Insertion junction: CLIP2.064510_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064510
Chromosome:chromosome 3
Location:4241581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173900 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAATTGGCACTGAGGTAAATACTTTCATCTCCCTACACATTAGGCCC
Internal bar code:TGTTAAAGGATCCGTAAGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1196
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GATTAAGTGCCGCGCTTGAG
Suggested primer 2:GTGTTAACGTGTCGCACACC