Insertion junction: CLIP2.064511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064511
Chromosome:chromosome 16
Location:7683286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685725 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCTTAAAGTCCCAAGGTGCGTAAAATGAAAACATCGTACTTGGGCG
Internal bar code:ATTGTTTTGGTACCTTTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2955
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCGTTTTCGTTGGTTT
Suggested primer 2:TGCCGCTGCGATATGTGTAT