Insertion junction: CLIP2.064515_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064515
Chromosome:chromosome 7
Location:1451235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323650 (1 of 1) PTHR13109//PTHR13109:SF7 - NEUROCHONDRIN // NEUROCHONDRIN 3'UTR
Cre07.g323700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGCTCGCCCTAATCTACTGGCCCCTCCCAACCCTTGCGCCCTCGCC
Internal bar code:GAACTGAACGTATTGCACAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1722
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGTAGCAGCAGTAGCA
Suggested primer 2:CATGACTCCCTGACGCTCTC