Insertion junction: CLIP2.064523_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064523
Chromosome:chromosome 6
Location:7784973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303171 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTATTCTAGCTGAGACCAAACGCACAGCGATACGACGAAACCGCCGC
Internal bar code:CTTGAGAGGCAGCCTACTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2106
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCTTATCCTCACCTGCG
Suggested primer 2:AGACTAGGCCTTGCGACCTA