Insertion junction: CLIP2.064526_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064526
Chromosome:chromosome 13
Location:4750512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801579 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAATCCCGAGGGCGTGATGTGGTTAGGATTGATAACTAGCAATGCCC
Internal bar code:TCTCTAGTCTAGGGGTGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGTTCGACGGGTGTGG
Suggested primer 2:GTGATGAGGACGATGCCGAT