Insertion junction: CLIP2.064536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064536
Chromosome:chromosome 9
Location:882247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403450 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTGCCCTTGGAGAGATGCACCGGCCCGCACAGAGGCACCGCTACTGA
Internal bar code:TTGCGCTCACAATATCAAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2693
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGGAGTGCAGAATTGA
Suggested primer 2:GGAAACGAAGCCGAAACACC