Insertion junction: CLIP2.064547_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064547
Chromosome:chromosome 8
Location:3065390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375450 SDR13 (1 of 1) 1.1.1.243 - Carveol dehydrogenase; Short-chain dehydrogenase/reductase 5'UTR
Cre08.g375500 ATF1 Glucosamine-fructose-6-phosphate aminotransferase; (1 of 1) 2.6.1.16 - Glutamine--fructose-6-phosphate transaminase (isomerizing) / L-glutamine-D-fructose-6-phosphate amidotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGATACGGCCCAGTCGGCAGAGGGAGTTTGCGGCGGGTGCCTATAC
Internal bar code:ACAATTTGGAGGGCCGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGATGTTGACGAACGA
Suggested primer 2:GGGTGTTTAGGGTTAGGGCC