Insertion junction: CLIP2.064551_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064551
Chromosome:chromosome 5
Location:924039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246650 (1 of 1) IPR023214//IPR027377 - HAD-like domain // Zinc-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGGGGCGGGTGTGCGACGGCGTGCAGCGGGTACGTGCCTCTGGATTG
Internal bar code:CAAGCTCGGCACAGGAATCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2457
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGCGCCGGAATGTCATA
Suggested primer 2:TGGTTCTCGAAATCCCTGGC