Insertion junction: CLIP2.064556_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064556
Chromosome:chromosome 17
Location:2701230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717200 (1 of 1) PTHR10060:SF24 - DEOXYRIBONUCLEASE TATDN3-RELATED intron
Cre17.g717250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCACAACTCCTCTCGCGCTGTCAACTGCAGGCATCGACAGCGGCCTC
Internal bar code:GGCGTTGAAACCTTTGAATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1668
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACTAGTAGCTGCGAGGT
Suggested primer 2:TCCCACGCAGTTTCTCTGAC