Insertion junction: CLIP2.064564_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064564
Chromosome:chromosome 2
Location:2811831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094450 PHC38,PHC21 Pherophorin-chlamydomonas homolog 38; (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGACTAGCAGCTTTGACTCTCAACACGGCCTAGCAAAAGCCTAGGAG
Internal bar code:TCGATCGTTCCGGGAGTGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2705
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCGCGATCTTGCATTA
Suggested primer 2:CGCCAATAAGAACGCGGAAG