Insertion junction: CLIP2.064568_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064568
Chromosome:chromosome 16
Location:2076312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657350 SNRK2I (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCGCTGCGCGGGTTTGCGACTTGTGATGTAGGAAATTTGTTATGGG
Internal bar code:TTTTAGCCAGTGACTCAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2537
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCCTTGCACCTCATAC
Suggested primer 2:TTGCCGCAGTACTGTAAGCA