Insertion junction: CLIP2.064574_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064574
Chromosome:chromosome 17
Location:4372689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730483 (1 of 1) IPR000104//IPR016181 - Antifreeze protein, type I // Acyl-CoA N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACGTTACTCGCGTGCAGGGGCCGCAACACTGCTTGCGCGCTCCACCAA
Internal bar code:GCTTCTGGAGAACAAGTGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGGAGATGGGTCAGGT
Suggested primer 2:GAACTGAGGGTGGCGTGTAA