Insertion junction: CLIP2.064582_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064582
Chromosome:chromosome 12
Location:9576979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539750 (1 of 1) PF09649 - Histone chaperone domain CHZ (CHZ) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGATACTCAGTGAGAAGAATAGGATGACGAGAGCATGGCGTCAGCA
Internal bar code:AGTAGACGAGTTGTTTTATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:63.3333
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTTTTGCCATCCCC
Suggested primer 2:AAGGTCCGGCCAAATCATGT