Insertion junction: CLIP2.064583_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064583
Chromosome:chromosome 12
Location:5145172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526650 (1 of 8) IPR000719//IPR002290//IPR011009//IPR020635//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCGGCAACTGGTGAACATTAGATGGCGTGCTGTTATTGAGACCTAG
Internal bar code:AACGAGCAGCCCGGTGGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:46.2963
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCACGCACAATTGAACA
Suggested primer 2:CATGGCGCTCTTCATCAAGC