Insertion junction: CLIP2.064592_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064592
Chromosome:plastome
Location:190074
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802332 ChreCp067,2717046,psaC photosystem I iron-sulfur center; (1 of 1) K02691//K05575 - photosystem I subunit VII (psaC) // NAD(P)H-quinone oxidoreductase subunit 4 (ndhD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATACTCCCTTTTTTAAAGGTTTTTTAAACGCCAAGTGAATTAAAAAA
Internal bar code:CCGTATTTAACACTCGCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCCGGTTCCTGGCAATT
Suggested primer 2:GCCTTTGGCTGGAAGAGTCT