Insertion junction: CLIP2.064597_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064597
Chromosome:chromosome 8
Location:130535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358535 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACGCGGCTGCATCAATGCCCCCCCCAGCTCAGCGTAGCCATATATC
Internal bar code:AGTTGTCACGTAGCGAATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGACTCATCCTCATCGG
Suggested primer 2:CAGCCTTGTCTCAGCACTGA