Insertion junction: CLIP2.064618_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064618
Chromosome:chromosome 16
Location:3695854
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g679876 (1 of 1) PTHR15859//PTHR15859:SF4 - SETA BINDING PROTEIN 1 // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGCGCGAGTTTTGCGTGAATTCCCCGCCAGTTTTTTCCGAGTTCCCG
Internal bar code:GGCGGCTTAACGTAATAACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2209
LEAP-Seq percent confirming:17.9487
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTGTGAGCAGGTAGTT
Suggested primer 2:CTTCTACTCTGAGCGAGCGG