Insertion junction: CLIP2.064624_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064624
Chromosome:chromosome 13
Location:1347291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571450 (1 of 2) K17278 - membrane-associated progesterone receptor component (PGRMC1_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGCGTCCTGGCGAATTGGCGGGGCCATCAGGGGCCTGGGGCCATGC
Internal bar code:TTGTAAATCGTGGGATGGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCCCGACTCTGGAAACA
Suggested primer 2:CGGGCGGTTCATTTTGGTTT