Insertion junction: CLIP2.064636_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064636
Chromosome:chromosome 17
Location:1668218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708000 FAP260 Membrane-associated Flagellar Associated Protein 260; (1 of 11) PF13426 - PAS domain (PAS_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCACGATACGATGGTCGGTGCCCCTGTTTAGTTGAACACAGGCTGAA
Internal bar code:ATCGAGTTCTATCCCTTCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCAGCCACGGTTTATT
Suggested primer 2:ACCATGTTCCGGCCATTCAT