Insertion junction: CLIP2.064647_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064647
Chromosome:chromosome 3
Location:1672820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153050 RWP1 (1 of 1) IPR000104//IPR003035 - Antifreeze protein, type I // RWP-RK domain; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTCAAGACTTACATTTCGTTTGAATAGATTTTGGCTATTTGATTGC
Internal bar code:CTCACGTTCTTTGTGTACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2980
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGAGGTGAGCCGATGA
Suggested primer 2:GCCCCAGATACAGTCGGATG