Insertion junction: CLIP2.064662_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064662
Chromosome:chromosome 2
Location:3533535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099150 SNAPA1,FAP375 Alpha-SNAP, SNARE complex protein; (1 of 1) K15296 - alpha-soluble NSF attachment protein (NAPA, SNAPA, SEC17) 3'UTR
Cre02.g099200 (1 of 1) K06100 - symplekin (SYMPK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTTTGAGGCAATCAAGCGGGACACGAGAGAAGATTCTGAGTGCGACA
Internal bar code:TCGGGCTTTTTACGCGGTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGCATGCATGTGTACGG
Suggested primer 2:GCGTGGGGTATTGGGTTGTA