Insertion junction: CLIP2.064663_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064663
Chromosome:chromosome 3
Location:6145392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190700 5'UTR
Cre03.g190750 (1 of 2) 2.7.4.9 - dTMP kinase / TMPK 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGTGAAGCCTGGAGCACGAGTGCACGGGACGGCGTGTGAGTGCTGAA
Internal bar code:GAGGGAGTTCTAGGAATAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1685
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCCCACTGATCGTGCTC
Suggested primer 2:CCAAAAGAAGGCAAGGTGGC