Insertion junction: CLIP2.064666_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064666
Chromosome:chromosome 3
Location:1627427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152650 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGCGGTGCTGTGTGTGTGTGTGTGTGTTGCACAACGAAAGGGAGAGA
Internal bar code:GTAAGGCCGCGTTTAGATCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2700
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGTCTCGCTCTCTTACA
Suggested primer 2:TGGGACTTTGAGATGGGGGA