Insertion junction: CLIP2.064667_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064667
Chromosome:chromosome 7
Location:4645109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344600 PGD1,PGDH1 (1 of 1) PTHR10996:SF159 - D-3-PHOSPHOGLYCERATE DEHYDROGENASE; D-3-phosphoglycerate dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAAAGACCCTCCTCGCTAATTGTAAAATCACTCTGAATCCGCAATCC
Internal bar code:TTTTGGGTTGGCACTATTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTCCAGACCCCAACTGC
Suggested primer 2:AGGGGGCGTTAAATTGAGGG