Insertion junction: CLIP2.064677_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064677
Chromosome:chromosome 10
Location:6341709
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g463934 (1 of 30) PF00078//PF03372 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCGCGCATGCCCGTGTCCATGTTTGGTCGGGCGGCCGCGGCGTCGGC
Internal bar code:TCGTGAGGCGCGCCGTCGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2653
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACACAGCAGTCACAT
Suggested primer 2:TCTTTTCTGCTCGCGTGTCT