Insertion junction: CLIP2.064685_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064685
Chromosome:chromosome 7
Location:1851085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325737 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGATTAGCAACTTGCCGCTGCTCGTTCCAAGCACGCGGAGTGGGGT
Internal bar code:GAGCGCCAAGGTAGGGGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1850
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAAACCGACCCCTTTTG
Suggested primer 2:CATACGCATGTGCACGACAG