Insertion junction: CLIP2.064694_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064694
Chromosome:chromosome 7
Location:4129234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342600 (1 of 48) IPR011050 - Pectin lyase fold/virulence factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGATCTCTTGGACATAGCCGGGGTCGGTTCGTGCAGGCATGGGCCTG
Internal bar code:CTCGGAAATGGCAACCGGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:
Suggested primer 2:GTCAGATACGGCCATCCTGG