Insertion junction: CLIP2.064711_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064711
Chromosome:chromosome 14
Location:3990511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633150 OPR66 OctotricoPeptide Repeat protein, probably a pseudogene 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAACCCTCCCGCCCCCGCCTGTCATCCCCCTGCACCTCACAGACGTCGC
Internal bar code:TGGGTTCTAGCAAGTTAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAAGTCACGCGCTCACA
Suggested primer 2:TTCAATGCAAGTGCTGGTGC